PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.5G394500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 410aa    MW: 43310.1 Da    PI: 6.7857
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.5G394500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.66.5e-14325372552
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                         +r+rr++kNRe+A rsR+RK+a++ eLe +   L++eN +Lk e +++
  Sevir.5G394500.1.p 325 RRQRRMIKNRESAARSRARKQAYTVELEAELNHLKEENARLKAEEKTI 372
                         79****************************************886665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-13321387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.059323368IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-10325371No hitNo description
PfamPF001703.2E-11325372IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-13325371No hitNo description
CDDcd147078.24E-25325366No hitNo description
PROSITE patternPS000360328343IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010152Biological Processpollen maturation
GO:0010187Biological Processnegative regulation of seed germination
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MASEMSKNVK VLDEQEVTSH QRDQGLRARI SGVAAEDQAD PLARQASIMS LTLEELQNSL  60
CEPGRNFGSM NMDEFMANIW NAEEFQAATG GCKEDAEQEA AAAAAAVPTA AVEKGGGSGG  120
LVRQGSYALP PPLSRKTVEE VWAEINQAPG DAQAHPAPQA IVQPQMGSGG LAASGRQVTL  180
GEMTLEDFLV KAGVVRGAFA GGHGQAVGMV PAGPMGHMQQ QGQLAATPMM YQVAPANAAA  240
VYPVMGDGMG YHNGYAGGMA VVPPPPPSQC VAPAVSPGSS DGMSAMTQAE MMSCIGNGGM  300
VRNGGSNARK RDSPEDGCTE KTVERRQRRM IKNRESAARS RARKQAYTVE LEAELNHLKE  360
ENARLKAEEK TILLSKKKML VEKMMEQARE NINAKKGGRG LRRCGSAMW*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00294DAPTransfer from AT2G36270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF3147010.0KF314701.1 Setaria italica clone SiABRE hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970655.10.0PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 isoform X1
TrEMBLK3XIK90.0K3XIK9_SETIT; Uncharacterized protein
STRINGSi001731m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38303558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-40ABA-responsive element binding protein 3